Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPRARWLQSAALMGALAVVLITAAPVAADAYQVPAPPSPTASCDVISPVAIPCVALGKFADAVAAECRRVGVPDARCVLPLAHRVTQAARDAYLQSWVHRTARFQDALQDPVPLRETQWLGTHNSFNSLSDSFTVSHADSNQQLSLAQQLDIDVRALELDLHYLPRLEGHGAPGVTVCHGLGPKNANLGCTVEPLLATVLPQIANWLNAPGHTEEVILLYLEDQLKNASAYESVVATLDQVLRRADGTSLIYRPNPARRATNGCVPLPLDVSREEIRASGARAVLVGSCAPGWSAAVFDWSGVELESGSNSGYRPYPACDATYGRGVYAWRLVRYYEDSTLATALANPTRPPANPQALTPPKVPAMTDCGVNLFGFDQLLPEDGRIQASLWSWAPDEPRAGAGACALQGADGRWVAASCGDPHPAACRDAAGRWTVTPAPVVFAGAALACTAIGADFTLPRTGNQNARLHAVAGPAGGAWVHYLLPP |
1DJX Chain:A ((165-328)) | ------------------------------------------------------------------------------------------------------------DMDQPLSHYLVSSSHNTYLLEDQLTG-----PSSTEAYIRALCKGCRCLELDCWDGPN------QEPIIYHGY-------TFTSKILFCDVLRAIRDYAFK--ASPYPVILSLENHCSLEQ-----QRVMARHLRAI-LGPILLDQ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65031 for 857 contacts (-75.9/contact) +
2D Compatibility (PS) -13028 + (NN) -3772 + (LL) 20152
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: -68429.0 ( -79.85 by residue)
QMean score : 0.343
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