Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPGRAPGSTLARVGSIPAGDDVLDPDEPTYDLPRVAELLGVPVSKVAQQLREGHLVAVRRAG---GVVIPQVFFTNSGQVVKSLPGLLTILHDGGYRDTEIMRWLFTPDPSLTITRDGSRDAVSNARPVDALHAHQAREVVRRAQAMAY
1J9I Chain:A ((1-48))
---------------------------MEVNKKQLADIFGASIRTIQNWQEQG-MPVLRGGGKGNEVLYDSAAVIK-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32640 for 307 contacts (-106.3/contact) +
2D Compatibility (PS) -4773 + (NN) -642 + (LL) 5136
1D Compatibility (HY) -2400 + (ID) 300
Total energy: -35619.0 ( -116.02 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1J9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J9I-query.scw
PDB file :
Tito_Scwrl_1J9I.pdb
: