Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIEPQHAVNIVLKEAARSGRADETMVLVTEKVEATLRWAGNSMTTNGVSHSRNVTVISIVRRGDSAFVGSVVSAEVDPSVLPGLVVSSQDAARSAPEAGDAAPLLADTGEPDD--WDAPVPGTGAGVFTGIAGSLSRGFRGADRLYGYAHRSVSTTFLASSTGLRRRYTQPTGAIEINAKRGDASAWVGIGTPDFVEVPIDLMLERLSTRLRWAQRTVELPAGRYQTIMPPSTVADMMIYLGWSMAGRGAQEGRTAFSAPGGGTRVGERLTELPLTLFTDPAAPGL--ACTPFVAVSNSSETQSVFDNGME---------ISQVDWIRSGVINALAYPRATAAKFDAPVAVAADNLIMTGGSADLADMIAGTERGLLLTTLWYIREVDPTTLLLTGLTRDGVYLVEDGEVSAAVNN---FRFNESPLDLLRRATEAGVSEPTLPREWSDWVTRTAMPPLRIPDFHMSSVSQAQ |
| 1TZZ Chain:A ((6-392)) | --VRIVDVREITKPISSTKMTTSLVAVVTDVVREGKRVVGYGFNSNG----RYGQGGLIRERFASRILEADPKKLLNEAGDNLDPDKVWAAMMINEKPGGHGERSVAVGTIDMAVWDAVAKIAGKPLFRLLAERHGVKANPRVFVYAAG-----------------------GYYGLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEIGKDA-------------QLAVDANGRFNLETGIAYAKMLR------DYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLEVLKTHGWSPSR----CIPHGGHQMSLNIAAGLGLGGNES---YPDLFQPYGGFPDGVR------VENGHITMPDLPGIGFEGKSDLYKEMKALAE-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67522 for 3112 contacts (-21.7/contact) +
2D Compatibility (PS) -37132 + (NN) 1837 + (LL) 5164
1D Compatibility (HY) 2000 + (ID) 2600
Total energy: -98253.0 ( -31.57 by residue)
QMean score : 0.235
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