Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGFPCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVS-YIPTALNVSMG-GIVGWRCVP--
1ZLD Chain:A ((19-118))
------------------------GNIGQVDIDSVILGRPGA----IGSWELNNFITIGLNRVNADTVRVNIRNTGRTNRLIITQWDNTVTRGDVYELF----------GDYALIQGRGSFCLNIRSDTGRENWRMQLEN
General information:
TITO was launched using:
RESULT:
Template:
1ZLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65086 for 659 contacts (-98.8/contact) +
2D Compatibility (PS) -9924 + (NN) 1171 + (LL) 1908
1D Compatibility (HY) 3200 + (ID) 250
Total energy: -68981.0 ( -104.68 by residue)
QMean score : -0.058
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLD-query.scw
PDB file :
Tito_Scwrl_1ZLD.pdb
: