Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFYSAYQHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDAVEDALLDLVTES-ADLLPVLVVGAPLRH-----------RHRIYNTAVVIHRGAVLGVVPKSYLPTYREFYERRQMAPGDGERGTIRIGGADVAFGTDLLFAASDLPGFVLHVEICEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGESTTDLAWDGQTM-IWENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNRRHHRELTESFRRIDFALDPPAGDIGLLREVERFPFVPADPQRLQQDCYEAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEIDIGDTARLMLHTIGHPYSVGEKVYDVTFENVQAGLRTDYLFRIANQRGGIVLGTGDLSELALGWSTYGVGDQMSHYNVNAGVPKTLIQHLIRWVISAGEFGEKVGEVLQSVLDTEITPELIPTGEEELQSSEAKVGPFALQDFSLFQVLRYGFRPSKIAFLAWHAWNDAERGNWPPGFPKSERPSYSLAEIRHWLQIFVQRFYSFSQFKRSALPNGPKVSHGGALSPRGDWRAPSDMSARIWLDQIDREVPKG |
| 4F4H Chain:A ((6-565)) | ----------KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYAASDAALAELAAQLKPFAGLAVLVGHPLRAPANRAIERGVPPVDTYNAASLIVGGEVAGTYRKQDLPNTEVFDEKRYFATDAAP----------------YVFE---LNGVKFGVVICEDVWHASA-AQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQ--DELVFDGGSFVLDGAGELVAKMPQFE--EGNAIVEFDGARALPA---------------------------------------------AIAP----ALSVEAQVYRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGA-----ERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEIAIAPMFDAFRASLAAEF--AGLAEDATEENIQARIRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLY-GDMAGGFAVIKDIAKTLVYRLCRYRNAAAEY-GQPDIVPERILTR--------------------LPPYDVLDAIMRMYMEEDRPLAEIVAA---G--------------------YS----EADVKRVTRLIK-INEYKRRQAPVGIRVT-HRAFG-R-DWRYPITSR---FVESID------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F4H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -294585 for 4488 contacts (-65.6/contact) +
2D Compatibility (PS) -56069 + (NN) -10411 + (LL) 6064
1D Compatibility (HY) -23200 + (ID) 7700
Total energy: -385901.0 ( -85.99 by residue)
QMean score : 0.444
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