Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPDSGQLGAADTPLRLLSSVH--YLTDGELPQLYD----Y-PDDGTWLRANFISSLDGGAT-VDGTSGAMAGPGDRFVFNLLRELADVIVVGVGTVRIEGYSGVRMGVVQRQHRQAR----GQSEVPQLAIVTRSGRLDRDMAVFTRTEMAPLVLTTTAVADDTRQRL-AGLAEVIACSGDDPGTVDEAVLVSQLA-ARGLRRILTEGGPTLLGTFVERDVLDELCLTIAPYVVGGLARRIVTGPG---QVLTRMRCAHVLTDDSGYLYTRYVKT |
| 3ZPG Chain:A ((128-378)) | -PNPLVAGKGVQILKNAGIEVEIGICEDLAAKLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGES--ITGSAARQDVQHWRAISGAVITGIDTVIADDCQLNV--------RSLHNIDIETVAQPKRVILDRRGRLPLTAKILEN--PETVMVMGPYR-----QELADLGVIQLE-------IQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFLQEGLIDEMISYVAPTLLGQSARAMFNADFEYMAQQLRFKLLDVIQLD-QDIRLRLIPT |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128473 for 1665 contacts (-77.2/contact) +
2D Compatibility (PS) -24865 + (NN) -3981 + (LL) 648
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -165821.0 ( -99.59 by residue)
QMean score : 0.366
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