Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSASRTMVSSGSEFESAVGYSRAVRIGPLVVVAGTTGS--------GDDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAFGKIRPVTSMVEVTALIAPGLLVEIEADAYVGSAVADRNSGAGPKDPSPAGG
1X25 Chain:A ((-1-124))
---HMETVFTEKAPKPVGPYSQAIKVGNTLYVSGQIPIDPRTNEIVKGDIKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFKDKPPARVTVEVSRLP-KDALIEIAVICSK---------------------
General information:
TITO was launched using:
RESULT:
Template:
1X25.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52073 for 869 contacts (-59.9/contact) +
2D Compatibility (PS) -12817 + (NN) -4176 + (LL) -196
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -76462.0 ( -87.99 by residue)
QMean score : 0.420
(partial model without unconserved sides chains):
PDB file :
Tito_1X25.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X25-query.scw
PDB file :
Tito_Scwrl_1X25.pdb
: