Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFAKGHGTQNDFVLLPDVDAELVLTAARVAALCDRRKGLGADGVLRVTTAGAAQAVGVLDSLPEGVRVTDWYMDYRNADGSAAQMCGNGVRVFAHYLRASGLEVRDEFVVGSLAGPRPVTCHHVEAAYADVSVDMGKANRLGAG-E---------AVVG--GRRFHGLAVDVGNPHLACVDSQLTVDGLAALDVGAPVSFDGAQFPDGVNVEVLTAPVDGAVWMRVHERGVGETRSCGTGTVAAAVAALAAVGSPTGTLTVHVPGGEVVVTVTD--ATSFLRGPSVLVARGDLADDWWNAMG |
| 2GKE Chain:A ((1-274)) | MQFSKMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYD--------------PELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDD----NQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCGAVSMGNPHCVVQVDDIQTANV---EQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQGLLN-NNVQVDLPGGSLMIEWNGVGHPLYMTGEATHIYDGFITL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140545 for 2339 contacts (-60.1/contact) +
2D Compatibility (PS) -28540 + (NN) -12065 + (LL) 2188
1D Compatibility (HY) -15600 + (ID) 3500
Total energy: -198062.0 ( -84.68 by residue)
QMean score : 0.396
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