Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATSPLATEA
3GWC Chain:C ((2-244))
-AETAPLRVQLIAKTDFLAPPDVPWTTDADGGPALVEFAGRACYQSWSKPNPKTATNAGYLRHIIDVGHFSVLEHASVSFYITGISRSCTHELIRHRHFSYSQLSQRYVPEKDSRVVVPPGMEDDADLRHILTEAADAARATYSELLAKLEAKFADQPNAILRRKQARQAARAVLPNATETRIVVTGNYRAWRHFIAMRASEHADVEIRRLAIECLRQLAAVAPAVFADFEVTTLADGTEVATS------
General information:
TITO was launched using:
RESULT:
Template:
3GWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113895 for 1853 contacts (-61.5/contact) +
2D Compatibility (PS) -27037 + (NN) -17173 + (LL) 688
1D Compatibility (HY) -29200 + (ID) 12150
Total energy: -198767.0 ( -107.27 by residue)
QMean score : 0.594
(partial model without unconserved sides chains):
PDB file :
Tito_3GWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GWC-query.scw
PDB file :
Tito_Scwrl_3GWC.pdb
: