Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVL------PNGVLDAISLPAERADMPRTM-PAALHWDRILFCAKEATYKAWFPLTKRWL---GFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL |
1FTH Chain:A ((4-115)) | -----------------------------------------------------------------------------------------------------------IVGHGIDIEELASIESAVTRHEGFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAM----GTGISKLGFQDLEVLNNER-----GAPYFSQA--------PFSGKIWLSISHTDQFVTASVI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39338 for 669 contacts (-58.8/contact) +
2D Compatibility (PS) -11063 + (NN) -4532 + (LL) 6464
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -50619.0 ( -75.66 by residue)
QMean score : 0.320
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