Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTTIRIDDELYREVKAKAARSGRTVAAVLEDAVRRGLNPPKPQAAGRYRVQPSGKGGLRPGVDLSSNAALAEAMNDGVSVDAVR
2K9I Chain:A ((12-52))
-KLGVYIPQEWHDRLMEIAKEKNLTLSDVCRLAIKEYLDNHD-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K9I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7918 for 199 contacts (-39.8/contact) +
2D Compatibility (PS) -4737 + (NN) -5483 + (LL) 1860
1D Compatibility (HY) -3200 + (ID) 350
Total energy: -19828.0 ( -99.64 by residue)
QMean score : 0.720
(partial model without unconserved sides chains):
PDB file :
Tito_2K9I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K9I-query.scw
PDB file :
Tito_Scwrl_2K9I.pdb
: