Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPE-------------------------DHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS--D------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWM-CCIGSSWMHLSTGVI-GPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 4GNU Chain:A ((21-260)) | -----------------------------------------------------------------------KLTFKTDLEKLERE---KAAQIGVAIVDPQGEIVAGHRMAQRFAMCSTFKFPLAALVFERIDSGTERGDRKLSYGPDMIVEWSPATERFLASGHMTVLEAAQAAVQLSDNGATNLLLREIGGPAAMTQYFRKIGDSVSRLDRKEPEMSDNTPGDLRDTTTPIAMARTVAKVLYGG-ALTSTSTHTIERWLIGN------QT-GDATLRAGFPKDWVVGEKTGTCANG-----GRNDIGFFKAQERDYAVAVYTTAP----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4GNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -100190 for 1683 contacts (-59.5/contact) +
2D Compatibility (PS) -22720 + (NN) -12119 + (LL) 7504
1D Compatibility (HY) -400 + (ID) 2000
Total energy: -129925.0 ( -77.20 by residue)
QMean score : 0.543
|
|
|