Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEQEMTEQWLEGCAVQRI-MFR-DGLVLNFDDY---NELVIS--VPL-QLTLPAIETSPAEVVAIDPNDPADHERPLFD-FAGATCTAFVWYD-TGDLHLEFSDGHQIDVHPDDRVTAWELYGKYHGYAACLAPGKL-RVVRHDVADANGDQ
3DOA Chain:A ((17-152))
---------FLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQLTT-------K-------PPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDT-IYRTVILEIMGKHSNLILVDENRKIIEGFKHLTP------
General information:
TITO was launched using:
RESULT:
Template:
3DOA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69791 for 731 contacts (-95.5/contact) +
2D Compatibility (PS) -11402 + (NN) 3840 + (LL) 1400
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -82853.0 ( -113.34 by residue)
QMean score : 0.280
(partial model without unconserved sides chains):
PDB file :
Tito_3DOA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DOA-query.scw
PDB file :
Tito_Scwrl_3DOA.pdb
: