Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANTDRPALPHKRAVPPSRADSGPRRRRTKLLDAVAGFGVTLGSMFKKTVTEEYPERPGPVAARYHGRHQLNRYPDGLEKCIGCELCAWACPADAIYVEGADNTE----EERFSPGERYGRVY-------QINYLRCIGCGLCIEACP--TRALTMTYDYELADDNRADLIYEKDRLLAPLLPEMAAPPHPRTPGATDKDYYLGNVTAEGLRGVRESQTTGDSR |
| 2C3Y Chain:B ((686-763)) | ------------------------------------------------------------------------------ENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVM-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C3Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38092 for 330 contacts (-115.4/contact) +
2D Compatibility (PS) -6622 + (NN) -1328 + (LL) 6164
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -46128.0 ( -139.78 by residue)
QMean score : 0.314
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