Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MAIDPNSIGAVTEPMLFEWTDRDTLLYAIGVGAGTGDLAFTTENSHGIDQQVLPTYAVICCPAFGAAAKVGTFNPAALLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCDPESGSLVAETLTTLVLRGQGGFGGARGERPAAPEFPDRHPDARIDMPTREDQALIYRLSGDRNPLHSDPWFATQLAGFPKPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVFPGETLSTVIWRTEPGRAV-FRTEVAGSDGAEARVVLDDGAVEYVAG |
| 3WEW Chain:A ((8-258)) | RTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDF--------------------------PFAAMGAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSV----GNDVAWHQVTTFLHQQ-------------------PPPAAVLRIT-PAKIRRYAAVGGDHNPIHTNPIAAKLF-GFPTVIAHGMFTAAAVLANIEARFPDA-----VRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100322 for 1810 contacts (-55.4/contact) +
2D Compatibility (PS) -23807 + (NN) -2664 + (LL) 2804
1D Compatibility (HY) -8800 + (ID) 2200
Total energy: -134989.0 ( -74.58 by residue)
QMean score : 0.372
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