Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSKAKVAIVGSGNISTDLLYKLLRSE-------WLEPRWMVGIDPESDGLARAAKLGLETTHEGVDWLLAQPDKPDLVFEATSAYVHRDAAPKYAEAGIRAIDLTPAAVGPAVIPPANLREHLDAPNVNMITCGGQATIPIVYAVSRIVEVPYAEIVASVASVSAGPGTRANIDEFTKTTARGVQTIGGAARGKAIIILNPADPPMIMRDTIFCAIPTDADREAIAASIHDVVKEVQTYVPGYRLLNEPQFDEPSINSGGQALVTTFVEVEGAGDYLPPYAGNLDIMTAAATKVGEEIAKETLVVGGAR |
4H3V Chain:A ((4-112)) | -MTNLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVR-AAAGKLGWSTTETDWRTLLER-DDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLAN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44718 for 761 contacts (-58.8/contact) +
2D Compatibility (PS) -10942 + (NN) -5544 + (LL) 12708
1D Compatibility (HY) -400 + (ID) 1200
Total energy: -50096.0 ( -65.83 by residue)
QMean score : 0.559
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