Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVLPACRLGLVVCVATAVITATMVLATPSYACACGAAVTAHGSQATLNHEVALLHWDGTTETIVMQLAMNADTDNVALVVPTPTPAIVTTADQSTFGELD-T-LSAPLIEHQRHWSLRRGVGASGPQEAAARAPHVLNQ-VRLGPLEATTLTGGDLSGLQTWLSDNGYAIRPAVSAALDPYVRDGWAFVAIRLT-STDLIVGGLDPVRMTFRSSRLVYPMRLSVAAQEPQHVTIFTLSDHRQQRT-DADAATQTTHVRFAGDMSTAVRDPLLRELIGNHGSYLTKVEVDIYQTSRISSDFTFGNAPNDDPYRQVV-TVYDDVALPPLLLVVVSAIAVGAAGGAVVVVLRRRRRAHTG |
1T98 Chain:A ((8-281)) | ----------------------------------------------------------------VPELVAWARKNDFSISLPVDRLSFLLAVATLNGERLDGEMSEGELVDAFRHVSDAFE---QTSETIGVRANNAINDMVRQRLLNRFTI----------------YRLTPLGIGITDYYIRQRE-FSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPLKYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLRELQDTLEAAGDKLQANLLRIQDA-------TMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIGYDRHV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38924 for 1666 contacts (-23.4/contact) +
2D Compatibility (PS) -26006 + (NN) 6112 + (LL) 6336
1D Compatibility (HY) 8000 + (ID) 850
Total energy: -45332.0 ( -27.21 by residue)
QMean score : 0.036
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