Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MIQVCSQCG-TGWNVRERQRVWCPRCRG--------MLLAPLADMPAEARWRTPARPQVPTASDTRRTPPRLPPGFRWIAVRPGAAPPPRHGPRLRGPTPRYAGIPRWGLTDHVDQAPVPASAKAGPSPAAVRTTLLVSLLVFSIAVVVFVVRYVLLVINRNTLLNSVVASASVWLGVLVSLAAIAAAGTTIVLLVRWLVARRAAA---------FMHQGLPERRSARELWAGCLLPMVNLLWAPLYVIELALVEDRYTRLRRPIVVWWIV----------------WIVSNAISMFAFATSWVTDAQGIANNTTMMVLAYLCAAAAVAAAARVFEGFEQ------KPVERPAHRWVVVNTDGRSAPASSVAVELDGQEPAA------ |
| 3QQC Chain:A ((2-428)) | KTEVWVCENCGHIALEDKRRRRVYCPVCGEEERISKVEMSYAFKLLLDELKAMVIRPKLNLSEKVIGSIEFGILSPQEIRKMSAVEVTVPDTYDPIEGGVMD-----KRMGVIDPGLRCE-TCGGRAGECPGHF-GHIELARPVIHVGFAKTIYRILESTCRECGRIKLTDEEIEEYMKKIELARNRRSEFNEIIKEIHKKAKERMVCPPIKFEKPTIYWEIRKDNEYRHRLMPTEVRDWLEKI--PDKDLPLLGLDPEKSRPEWMVLTVLPVPPVTARPSITLIRAEDDLTHKLVDIIRINNRLKQNIEAGAPQLIIEDLWDLLQYHVTTYINNEAPGVPPAKHKSGRPLKTLAQRLKGFEITVQHLFEAAEKGEVDNLNGVIENVLIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QQC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199875 for 2522 contacts (-79.3/contact) +
2D Compatibility (PS) -34317 + (NN) -10671 + (LL) 960
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -249553.0 ( -98.95 by residue)
QMean score : 0.238
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