Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSAASQASLPRGRRTARPSGDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGENR
5F04 Chain:A ((28-218))
-----------------------DRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE--
General information:
TITO was launched using:
RESULT:
Template:
5F04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101744 for 1372 contacts (-74.2/contact) +
2D Compatibility (PS) -21176 + (NN) -17754 + (LL) 844
1D Compatibility (HY) -24800 + (ID) 9550
Total energy: -174180.0 ( -126.95 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_5F04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5F04-query.scw
PDB file :
Tito_Scwrl_5F04.pdb
: