Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MEKFKGA--------------LVVGALRLFALLP--WRAVQGVGAGIGWLMWK--LPNRSREVVRI--NLSKCFP-------ELSETELEKLVGQSLMDIGRTLTESAC--AWIWPPEKSLRYIRE-VEGMEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAK-----PIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLFVPYLGTTAL----------ISKFVPQLLSRGKARGVFFHAVRLPDG-SGYKVILEAAPADMY----------DKDLEVSVAAMSRELAKYVRAYP--SQYMWSMKRFKNRPDGEKKWY--------------------------------------------- |
4FDT Chain:A ((21-425)) | MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGKLSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYVPRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVAIAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQ----RIWVKILLNEEAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69295 for 2093 contacts (-33.1/contact) +
2D Compatibility (PS) -30014 + (NN) -2846 + (LL) -284
1D Compatibility (HY) -8000 + (ID) 2850
Total energy: -113289.0 ( -54.13 by residue)
QMean score : 0.288
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