Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRIAAVK---------------TYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHRPELAGRGFQA----LGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGG-----------FDLTPYYAHEEDCVHWHRVARDACAP------------FGADVY--PRYKEWCDRYFHLKHRNE----PRGIGGLF-FDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRG--------RYVEFNLVFDRGTLFGLQSGG----RTESILM-----SLPP---QVRWGYD--------WKPEPGSEEARL--------------TEYFLADRDWLAGQP----- |
| 4FDT Chain:A ((21-425)) | MQTKIQKYAGTAMPYPNRTDGMTPFYINHLGRHGARFPTSRKALDKVEKVLVSAQQENGLTSEGMALLSMIRRLSRLFDGQWGK-LSKLGETEQEGIAGRMIRNYPQLFSNSAKIEAIATYVPRSINSMDAFLSCMIRHNPALQVQRSEGKQYNHILRFFDLNKSYVNYKEKGDWLPIYKAFVHKKISPVPIMKKFLLNPEQYLDKEAEEFVMALFSVAAILPDTSIPLNLEDLFTLDEWHRYWQTQNLRQYMSKSSAPVGKMLPVA--IAWPLLSEFIRSAQEVISGKSDYQANFRFAHAETVIPFVSLMGIEKTDVQVCRPDSVSVYWKDYEISPMAANVQWLFYRDRDQRIWVKILLNEEAAALPISTACFPYYSWEKTRIFFNQRIEMAKKTLSVFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38712 for 2198 contacts (-17.6/contact) +
2D Compatibility (PS) -31413 + (NN) 3513 + (LL) 192
1D Compatibility (HY) -15600 + (ID) 2750
Total energy: -84770.0 ( -38.57 by residue)
QMean score : 0.167
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