Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------MRTFDLTAALGDRANQPEISRLLVAQLMTSNNEDTRKLRRAQEREQTQELNELAHRLAGMASLIHAHAVERACHQLEIACGESSVRKLADAVDDLVTALGELQCELHDWMTMTAPQGTAKS
1SR2 Chain:A ((775-890))
MQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL------------------
General information:
TITO was launched using:
RESULT:
Template:
1SR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28946 for 703 contacts (-41.2/contact) +
2D Compatibility (PS) -11046 + (NN) -4986 + (LL) 1164
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -49164.0 ( -69.93 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_1SR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SR2-query.scw
PDB file :
Tito_Scwrl_1SR2.pdb
: