Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNHHTYKKIELVGSSKTSIEDAINNALAEAAKSIQHLEWFEVVDTRGHIENGAVGHYQVTLKVGFRIANS
2VXA Chain:D ((4-67))
----HVYKIVELTGSSPNGIEEAVNNAIARAGETLRHLRWFEVVDTRGHIEGGRVNHWQVTVKVGFTLEG-
General information:
TITO was launched using:
RESULT:
Template:
2VXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25758 for 396 contacts (-65.0/contact) +
2D Compatibility (PS) -7010 + (NN) -1469 + (LL) 288
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -43549.0 ( -109.97 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_2VXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VXA-query.scw
PDB file :
Tito_Scwrl_2VXA.pdb
: