Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKTITWTAALLGSMALAGCSGPKTLYQWEGYQAQVHEYFKGES-KEAQAQALEADLEKIRAKNGAVPPGYHAQLGLLYSSIG----------KDDQMVREFETEKALFPESATYMDFLLNNARGGAR
3DSS Chain:A ((36-115))
-----------------------------------VFQKRQAGELDESVLELTSQILGANP-----DFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE
General information:
TITO was launched using:
RESULT:
Template:
3DSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12202 for 438 contacts (-27.9/contact) +
2D Compatibility (PS) -7382 + (NN) -2214 + (LL) 2584
1D Compatibility (HY) 400 + (ID) 300
Total energy: -19114.0 ( -43.64 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3DSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DSS-query.scw
PDB file :
Tito_Scwrl_3DSS.pdb
: