Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFAQNLLRLRQQ------NALTQRQMAER-----LGITVSQLRHFETKG-GHPSLVVLQTIAGRFAVPLDWLVCERSERQALP---------EDLRLQFEAIGRLRLDERRAIRALLDDLIRQYMAKRNAAAKPLPAACAEATETSP
3QWG Chain:A ((4-96))
TTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMR-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37564 for 459 contacts (-81.8/contact) +
2D Compatibility (PS) -8105 + (NN) -4654 + (LL) 4392
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -47681.0 ( -103.88 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_3QWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QWG-query.scw
PDB file :
Tito_Scwrl_3QWG.pdb
: