Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKMLAASLLLWMFSLTAQADCAVLGPGEDPCAGPVLGPTVCECP
3KIO Chain:A ((38-46))
---------------------------------RGPVLGPMVYAIC
General information:
TITO was launched using:
RESULT:
Template:
3KIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 517 for 14 contacts (36.9/contact) +
2D Compatibility (PS) -935 + (NN) -2186 + (LL) 2664
1D Compatibility (HY) -800 + (ID) 300
Total energy: -1040.0 ( -74.29 by residue)
QMean score : -0.068
(partial model without unconserved sides chains):
PDB file :
Tito_3KIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KIO-query.scw
PDB file :
Tito_Scwrl_3KIO.pdb
: