Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYLGYPLGQPQLTVQRLSLAAHE--------RLDWQVHPMPSALYVLKGELRLETRDGAQSTRVLEGEAAGCLMNIIHRLIAGAEPVEALLFHAGVEGMPVGLGERGEMPDA------- |
| 1JUH Chain:A ((3-350)) | SSLIVEDAPDHVRPYVIRHYSHARAVTVDTQLYRFYVTGPSSGYAFTLMGTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDTEMTGVIVPGGFEDLFYYLGTNATDTTHTPYIPSISTLQSFDVYAELSFTPRTDTVNGTAPANTVWHTGANALASTAGDPYFIANGWGPKYLNSQ---YGYQIVAPFVTATQAQDTNYTLSTISMSTTPSTVTVPTWSFPGACAFQVQEGRVVVQIGDY-AATELGSGDVAFIPGGVEFKYYSEAYFSKVLFVSSGSDGLDQNLVNGGEEWSSVSFPADW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32511 for 993 contacts (-32.7/contact) +
2D Compatibility (PS) -14400 + (NN) -1539 + (LL) 500
1D Compatibility (HY) -1200 + (ID) 1050
Total energy: -50200.0 ( -50.55 by residue)
QMean score : 0.174
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