Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRARE-PAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFY------LRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLD------D-------AAKRAGKAA-EFQRLRREYAALSQREWGGESPFKA-WIDAPFNNAKLLPFGLYDQWVAAFAVLFRQ-VGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP |
1Z5H Chain:A ((158-418)) | ----------------------------------------------MSTYLLYVGIGKFRYEYEKYRDIDLILAS--LKD----------IRSKYPLD-MARKSVEFYENYFGIPYALPKMHLISVPEFGAGAMENW----GAITFR----------EIYM---------------------DIAEN-SAV--TVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFATFMSYKTMDTLFPE----------WSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEE--FRKGISKYLNDHKFG---N----------AEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5054 for 1825 contacts (-2.8/contact) +
2D Compatibility (PS) -25287 + (NN) -7554 + (LL) 8212
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -36883.0 ( -20.21 by residue)
QMean score : 0.218
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