Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDAALRYPNILFDLDGTLTDPREGITRSVQFALARLGIDEP-DLARLEHFIGPPLLQC----FM----------QTYGF-----D----EARAWEAVNHYRERFRVTGLYENRVFDGIPELLEALVGRGHTLYVATSKPGVFAREIARHFAFDRHFKAIYGSELDGTRTHKEELIRHLLDSEGLAAEHCLMIGDRMHDLLGASRNGVACIGVGYGFGSEDELRAHQPTHYCADLAALRQVLESH
2HI0 Chain:A ((2-238))
-----MKYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELF-PGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEEAILGE
General information:
TITO was launched using:
RESULT:
Template:
2HI0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137345 for 1811 contacts (-75.8/contact) +
2D Compatibility (PS) -24175 + (NN) -19088 + (LL) 652
1D Compatibility (HY) -12000 + (ID) 2100
Total energy: -194056.0 ( -107.15 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_2HI0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HI0-query.scw
PDB file :
Tito_Scwrl_2HI0.pdb
: