Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVPNSVSYYRSASYSHVGMVRKVNEDASLDAP---EAGLWVVADGMGGHAAGDFVSSLIVDTLRRIPAASSLPAYVGALRTGLAQVNERVRQEAGLR-GVSVMGSTLVLLAAR-GNQASCLWAGDSRLYRLRGGVLEAISRDHSYVQELLD-----NALISEEEA---RHHPRANVVTRAVGVHE-Q-----LELSEAALHVL--PGDSFLLCSDGLNKTADDSELRDVLSH-SDPYAVVRSLVHLGLTRGAPDNITALVVRAF |
| 2IQ1 Chain:A ((9-261)) | ---------NVGCASQIG-KRKENEDRFDFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKE--KNLETLLTLAFLEIDKAFSSHARL-ATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131902 for 2020 contacts (-65.3/contact) +
2D Compatibility (PS) -23441 + (NN) -438 + (LL) 956
1D Compatibility (HY) -800 + (ID) 2650
Total energy: -158275.0 ( -78.35 by residue)
QMean score : 0.451
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