Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRALASELFGRSKDLRVANLLLQSNVALDGLDGLADGLLLVRELLGQYWDGVYPLLDADDDNDPTFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGAFADADADALAATRRALDGAQEHALAIESGVAERVGSAQGLDLGPLRQLLRQALQ--VFDLYGPQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHEPSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE |
3B8M Chain:A ((64-330)) | --KWTSAAVVTPPEPVQWQELEKTFTKLRVL------------------DLDIKIDRTEAFNLFIKKFQSVSLLEEYLRSSPYVMDQDELDLHRAIVALSEKMKAVDDNASKKKDEPSLYT----------------------------------SWTLSFTAPTSEEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFEKEKLAQDRIKMKNQLDANIQRLNYSLDIANAAGIKKPVYKDDPDFSISLGADGIERKLEIEKAVTDVAEL----NGELRNRQYLVEQLTKA---------------------------------NINDVNFTPFKYQLSPSLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4734 for 1712 contacts (-2.8/contact) +
2D Compatibility (PS) -28501 + (NN) -20660 + (LL) 7788
1D Compatibility (HY) 800 + (ID) 1750
Total energy: -47057.0 ( -27.49 by residue)
QMean score : 0.290
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