Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MNPRLLEYYNQELQHIRE-------SAAEFAEEFPKIA-GRLSLSGFECAD----PYVERLLEGFAYLTARVQLKLDAE----------------YPTFTHNLLEIAYPHYLAPTPSMTVVQLRPDPNEGALSSGFSIERGASLRGQLGPDDQ-TACEYRTAHPVTLWPLEVAQADYFGNPAAVLGRLAASEPRAKAGLRIRLRSGAGIPFDSLSLDALPLYLHGADEQPYRLYEQLLGNACAVFVRAPDNAWVERLPTSSLR-----ARGFDD-------EDALLPVVPRAFQGY-----RLLQEYFAL---------PARFLFVEFSGLNRALRRCHG-----EELEL--------VVLFG--------KHDQRLEGTVDAEQLVPFCTPAINLFPRRCDRIHLSDRVNEHH------VIVDRTRPLDFEVHSLQQVSGHGSG-PEQPFQPFYAVR--DPARYGREQ----------AYFRVRREPRVL------SSKQRRKGPRSTYVGS-ETFVALVDANQAPYRHDLRQ-LGIAALCTNRDLP-LFMPIGAHKSDFTLE---DSAPVM-QVRCLAGPSRPRASRAHDASAWRLISQ---LSLNYLSLAERG--QGAAALRELLRL---------YGDSGDPALQLQIEG--LREVSS------KPC-----------TRRLPMP-----------------------GPIVFGRGLE----------ITLDFDENAFRGT-GVFLLGAVFERFLAR---YVSINSFTETVLRTGER-------------GEVMRWQAKPGSRPNL--------------------- |
| 4PKF Chain:A ((8-864)) | KVLEYKGKKLNFTPEDPAEETIPADELHEHLQKPSTARTKRLKERCRWKHASAGEFIEKSVTAGIERMRYLTEAHKASEGKPEAIRRALGLANVLNKSTLVLQEDEFIVGYHAEDPNMFPLYPELSHMAVQDYLRSDYSPQPADEAAAINEYWKPHSLQSKCQPYFDPADLGRMYQVSSMEAPSFASGYNSIVPPYETVLEDGLLARIKLAEKHIAEAQADMSTFPWNGTKGLDNIAKIDNWKAMVIACKAVISWARRQGRLCKIVAENFETDPKRQAELLEIADICQRIPAEPCKGLKDAMQAKFFTFLICHAIERYASGYAQKEDTLLWPYYKASVVDKKFQPMSHMDAVELVEMERLKISEHGAGKSRAYREIFPGSNDLFILTVGGTNAKGEDACNDMTDAILEAAKRIRTAEPSIVFRYSKKNREKTLRWVFECIRDGLGYPSIKHDEIGTEQMKEYAKFSLNGNGATDEEAHNWVNVLCMSPGIHGRRKTQKTRSEGGGSIFPAKLLEISLNDGYDWSYADMQLGPKTGDLSSLKSFEDVWEAFRKQYQYAINLCISTKDVSRYFEQRFLQMPFVSAIDDGCMELGMDACALSEQPNGWHNPITTIVAANSLVAIKKLVFEEKKYTLEQLSQALKANWEGFEEMRVDFKRAPKWGNDDDYADGIITRFYEEIIGGEMRKITNYSGGPVMPTGQAVGLYMEVGSRTGPTPDGRFGGEAADDGGISPYMGTDKKGPTAVLRSVSKVQKNQKGNLLNQRLSVPIMRSKHGFEIWNSYIKTWHDLNIDHVQFNVVSTDEMRAAQREPEKHHDLIVRVSGYSARFVDIPTYGQNTIIARQEQDFSASDLEFLNVEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95591 for 4756 contacts (-20.1/contact) +
2D Compatibility (PS) -65627 + (NN) -14064 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 5350
Total energy: -185032.0 ( -38.90 by residue)
QMean score : 0.161
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