Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYRLHEADLEI---PDAWQ-DQSINI-FKLPASGPAREASFVISRDASQGDAPFADYVARQLENAEKQLPGFKLHKRWDINIHGHAAVLLDYQWQREGRDLMLRQVFIERRPAVLITTLTTTPADLPHHEPAWKQAMQTLVPRPTPS
3WTT Chain:A ((1-119))
GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVAKGDVPDGTLVTVMAGNDENYSA------ELRNATAAMKN-------------QVARF---------NDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDG--PREPRR
General information:
TITO was launched using:
RESULT:
Template:
3WTT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14331 for 805 contacts (-17.8/contact) +
2D Compatibility (PS) -11823 + (NN) -3561 + (LL) 2444
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -32471.0 ( -40.34 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_3WTT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WTT-query.scw
PDB file :
Tito_Scwrl_3WTT.pdb
: