Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKLSPIFSNITGVVRYQDLAYVASVSDEIQEQNIAHSYVTEWDCGTWCVAGEDDDMLPWEIVSATVVHE---PVEQALFLGARGQVFCMGSGDIHEEQLP--DGDDAIG-----GRGNMRGVACID----GVAYACGMDRQVYRRF----DENDWRAIDTGARPPAGSEAVVGFEAIGGFGAREIYAVGWDGEIWQYDGKRWQPRESPTNLILTAICCAEDGSVYACGQAGTLLRGRNDHWEIIAQDDVDEDLWSLAWFDGALYVSSATAVYTLVGGHLKEVDFGDEQPQRCFHLSAADGVLWSIAAKDIFSFDGQQWTRID- |
| 1TL2 Chain:A ((2-236)) | ------GGESMLRGVYQ-----------DKFYQGTYPQN--------------KNDNWLAR----ATLIGKGGWSNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSKD-KLYKASPPQSDTDNWIARATEVGS-------------GGWSGFKFLFFHPNGYLYAVHGQQFYKALPPVS--------------------------NQDNWLARA-TKIGQGGWDTFKF---LFFSSVGTLFGVQGGKFYEDYPPSYAYDN-----------WLARAKLIGNGGWDDFRFLFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55784 for 1585 contacts (-35.2/contact) +
2D Compatibility (PS) -23657 + (NN) -14057 + (LL) 6512
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -100986.0 ( -63.71 by residue)
QMean score : 0.203
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