Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MATVIDRHSQPTWRDFLELTKPKVVVLMLITSLIGMLLATKAPLDGFVPWQVLIFGNLGIGLCAGAA----AAVNHVVDRRIDSIMARTHKRPLAEGRV-SPSMALGFALLLALAGMAVLLAFTNPLTAWLTLASLLG--YAALYTGFLKRATPQNIVIGGLAGAAPPLLGWV-----AITGHLSAEPLLLVLII-------FAWTPPHFWALCIHRKDEYAKAD-IPMLPVTH---GERYTKLHILLYTLVLFAVSLMPFVIHM-----SGLVYLLCALALGARFLDWAWALYCDSRP---HAAIKTFKY----SIVYLFLLFMALLVDHYLPLKLLL |
| 3OPY Chain:I ((5-351)) | DSIIRDLERENVGPEFGEFLNTLQTDL------NSEKPPIEQVKSQLETHF--------NLAHETQEFSRKNDNAPVDKLLTNYYNNYEVNVLEFVLQMGFSRDLSIPLNVWFVLDMISQLSTSKQDLPLDYYLVLNNSQTGKYSDFVRYLIYEAVGAEIHLAN----RGPIRGNVGAGDRKITFHLLCKKTARMILVGDDRETDFEMSDRSFVTLLLDYYQRVGTTKKIDLLLLTNNFDTNMNNKLQQLKILESLNMLKSNCYVLDYQITVDQVTANFNSYVEGIPAFRRHEIANFLKKRKTPKNADELIFKYVGRWNICYQKKFHQGNISIHQISGYLD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OPY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -255464 for 2128 contacts (-120.0/contact) +
2D Compatibility (PS) -29978 + (NN) 2161 + (LL) 2284
1D Compatibility (HY) -10000 + (ID) 2550
Total energy: -293547.0 ( -137.95 by residue)
QMean score : 0.210
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