Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTLPPCPQCNSEYTYE----DG-ALLVCPECAHEWSPNEAATASDDGKVIKDSVGNVLQDGDTITVIKDLKVKGSSLVVKVGTKVKNIRLVDGDHDIDCKIDGIGAMKLKSEFVRKV
2FIY Chain:A ((181-223))
--SRTLCPACGSPPMAGMIRQTGLRYLSCSLCACEWHYVRIKCSHCEESKHLAYLSLEHGQPAEKAVLRAETCPSCQGYLKQFYLEFDRHADALADDLASLALDMRLAEDGYLRRSPN
General information:
TITO was launched using:
RESULT:
Template:
2FIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7671 for 175 contacts (-43.8/contact) +
2D Compatibility (PS) -3658 + (NN) -3216 + (LL) 180
1D Compatibility (HY) -1200 + (ID) 550
Total energy: -16115.0 ( -92.09 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_2FIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIY-query.scw
PDB file :
Tito_Scwrl_2FIY.pdb
: