Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRH--------A------------PLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
2XLG Chain:A ((41-135))
---------------IGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFHS-TK-QYPNMDELPVVGGAGRGDLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWMR
General information:
TITO was launched using:
RESULT:
Template:
2XLG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29354 for 472 contacts (-62.2/contact) +
2D Compatibility (PS) -8592 + (NN) -3692 + (LL) 888
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -43650.0 ( -92.48 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_2XLG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XLG-query.scw
PDB file :
Tito_Scwrl_2XLG.pdb
: