Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEG-NAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKILTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFKGKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP |
3B9X Chain:D ((24-326)) | ---------------------------------------RKIILDCDPGHDDAIAIMMAAKHPA-IDLLGITIVAGNQTLDKTLING-LNVCQKLEINVPVYAGMPQPIMRQQIVA--IHGDTGLDG-PVFEPLTRQAESTHAVKYIIDTLMAS-DGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGA-YGTGNFTPSAEFNIFADPEAARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFENYGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTKVGITIDTDWFWGLVEECVRGYI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136942 for 2823 contacts (-48.5/contact) +
2D Compatibility (PS) -32617 + (NN) -23149 + (LL) 2860
1D Compatibility (HY) -27200 + (ID) 6400
Total energy: -223448.0 ( -79.15 by residue)
QMean score : 0.598
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