Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHPSHVRALCASLCLGAGLPVHAGHVHAGQGFLEDAKASLTARNFHLHR-NFVGDASQGKAEEWTQSFILDARSGFTQGSVGFGLDVLGLYSLKLDGGKGTAGTQ--LLPIHDDGRPADDFGRLAVAGKLRVSNSELKIGEWMPVLPILRSDDGRSLPQTFRGGQLSANEIAGLTLYAGQFRGNSPRNDASMQDMSLFGRPAAT-----SDRFDFAGGEYRFNGERSLLGLWNAELKDIYRQQYLQLQHSQPLGDWLLGANLGGFRGRDAG-----SARA---------------GKLDNRTVSALFSARYGLHTLYLGLQKVSGDDGWMRVNGTSG----GTLANDSYNASYDNPGERSWQLRYDFDFVGLGLPGLTFMTRYLHGDHVRLAGVTDDGSEWGRESELGYTLQSGAFKRLNVRWRNSSQRRDWGSNTR-FDENRLIVSYPLSLL |
| 4FRX Chain:B ((8-437)) | -------------------------------GFIEDSKASLTLRNFYINTDNRN-----SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL----------GTVFPLESNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASSRDSNKFYYAGGDYKVNKDLTLQ-YYYGNLDDFYKQHFLGLIHNWQIGPGVLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTA--RGDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG------DQDENRLIVSYTLPLL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 17346 for 2831 contacts (6.1/contact) +
2D Compatibility (PS) -36867 + (NN) 2316 + (LL) 1240
1D Compatibility (HY) -31600 + (ID) 7850
Total energy: -55415.0 ( -19.57 by residue)
QMean score : ?
|
|
|