Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIG--CIAVMPLAGLIGSGLGICNPYNLRIILEEA--------KVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
| 1W0M Chain:H ((114-211)) | --------------------------------------------------------------------------------------------------------------------------------------GLDVVV-CAPDPRTSLAAAALGPHAVAVEP-PELIGTGRAVSR-YKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSELR------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -73785 for 647 contacts (-114.0/contact) +
2D Compatibility (PS) -10397 + (NN) -4924 + (LL) 11800
1D Compatibility (HY) -3600 + (ID) 1700
Total energy: -82606.0 ( -127.68 by residue)
QMean score : 0.418
|
|
|