Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------MADETELKRLYWHSR-RGMLELDVLLVPFVQEVYPGLDAEDQARFRKLLECEDQDMFGWFMQRGE----PEDADLRRMVRMILDRVQPD----
2LM4 Chain:A ((1-109))
MGHHHHHHSHMIKRTNEPLDKKRARLIYQSRKRGILETDLLLSGFAAKYLKKMNEEELEEYDSLLNELDWDIYYWATKNFKTSPLPDKWANSKLLKQLQEFSENKEKEI
General information:
TITO was launched using:
RESULT:
Template:
2LM4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48956 for 555 contacts (-88.2/contact) +
2D Compatibility (PS) -9155 + (NN) -7594 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -70255.0 ( -126.59 by residue)
QMean score : 0.709
(partial model without unconserved sides chains):
PDB file :
Tito_2LM4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LM4-query.scw
PDB file :
Tito_Scwrl_2LM4.pdb
: