Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSRNILVINCGSSSIKFALVNEAHSLFPLHGLAERLGSRDAVLRWKRGGDSDSLMIPNADHRAALAQLLPMVQ------NAAGGKLHGIGHRVVHGGELFTHATRIDDRVVEAIRATAPLAPLHNPANLQGIEAAMTLFPKLPHVAVFDTAFHQSLPEHAYRYALPEALYREHGVRRYGFHGTSHRYVSHRAAEMAGLAVGDSSWLSAHLGNGSSTCAIVNGQSLDTSMGLTPLEGLVMGTRSGDVDPNLHSHLARTLGWSLERIDSMLNNESGLLGLSDLSNDMRTLEQEREQGHPGAALAIEVFCYRLAKSLAAMSCALPQLDGVIFTGGIGENSPLVRAKTAAHLRLFDLRLDQEANARCVRGVAGPIQAAGHP-RVLVIPTNEERQIALDTLALLD |
| 4IZ9 Chain:A ((12-390)) | --ARRVLVINSGSSSLKFQLVDPESGVAASTGIVERIGE--S---------------PVPDHDAALRRAFDMLAGDGVDLNTAG--LVAVGHRVVHGGNTFYRPTVLDDAVIARLHELSELAPLHNPPALLGIEVARRLLPGIAHVAVFDTGFFHDLPPAAATYAIDRELADRWQIRRYGFHGTSHRYVSEQAAAFLDRPLRGLKQIVLHLGNGCSASAIAGTRPLDTSMGLTPLEGLVMGTRSGDIDPSVVSYLCHTAGMGVDDVESMLNHRSGVVGLSGV-RDFRRLRELIESGDGAAQLAYSVFTHRLRKYIGAYLAVLGHTDVISFTAGIGENDAAVRRDAVSGMEELGIVLDERRNLPGAKG-ARQISADDSPITVLVVPTNEELAIARDCVRVLG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -193489 for 3083 contacts (-62.8/contact) +
2D Compatibility (PS) -40595 + (NN) -16563 + (LL) 972
1D Compatibility (HY) -28800 + (ID) 8700
Total energy: -287175.0 ( -93.15 by residue)
QMean score : 0.535
|
|
|