Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKIIHIDCDCFYAALEMRDDPSLRGKALAVGGSPDKRGVVATCSYEARAYGVRSAMAMRTALKLCPDLLVVRPRFDVYRAVSKQIHAIFRDYTDLIEPLSLDEAYLDVSASPHFAGSATRIAQDIRRRVAEELHITVSAGVAPNKFLAKIASDWRKPDGLFVITPEQVDGFVAELPVAKLHGVGKVTAERLARMGIRTCADLRQGSKLSLVREFGSFGERLWGLAHGIDERPVEVDSRRQSVSVECTFDRDLPDLAACLEELPTLLEELDGRLQRLDGSYRPDKPFVKLKFHDFTQTTVEQSGAGRD----LESYRQLLGQAFARGNRPVRLIGVGVRLLDLQGAHEQLRLF
4R8U Chain:B ((1-337))-RKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVMLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDE--RRGGRGVRLVGLHVTLD------------


General information:
TITO was launched using:
RESULT:

Template: 4R8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -223995 for 2561 contacts (-87.5/contact) +
2D Compatibility (PS) -37163 + (NN) -24931 + (LL) 1572
1D Compatibility (HY) -32400 + (ID) 8400
Total energy: -325317.0 ( -127.03 by residue)
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_4R8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R8U-query.scw
PDB file : Tito_Scwrl_4R8U.pdb: