Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
3C0F Chain:B ((3-87))
IMDEIVNLQKEVSLEEAERYANIASYGDGILLSVHDSTGYRAPEVYCCGE------------------------KPWEVYACNRGANLISVNQ--FEFYFRIEVEG---------
General information:
TITO was launched using:
RESULT:
Template:
3C0F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -755 for 505 contacts (-1.5/contact) +
2D Compatibility (PS) -7855 + (NN) -2224 + (LL) 2528
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -11006.0 ( -21.79 by residue)
QMean score : 0.206
(partial model without unconserved sides chains):
PDB file :
Tito_3C0F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C0F-query.scw
PDB file :
Tito_Scwrl_3C0F.pdb
: