Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSNSLALKGRSDAYTQVDNFLHAYARGGDELVNGHPSYTVDQAAEQILREQASWQKAPGDSVLTLSYSFLTKPNDFFNTPWKYVSDIYSLGKFSAFSAQQQAQAKLSLQSWSDVTNIHFVD--AGQGDQGDLTFGNFSSSVGGAAFAFLPDVPDALKGQSWYLINSSYSANVNPANGNYGRQTLTHEIGHTLGLSHPGDYNAGEGDPTYADATYAEDTRAYSVMSYWEEQNTGQDF----KGAYSSAPLLDDIAAIQKLYGANLTTRTGDTVYGFNSNTERDFYSATSSSSKLVFSVWDAGGNDTLDFSGFSQNQKINLNEKALSDVGGLKGNVSIAAGVTVENAIGGSGSDLLIGNDVANVLKGGAGNDILYGGLGADQLWGGAGADTFVYGDIAESSAAAPDTLRDFVSGQDKIDLSGLDAFVNGGLVLQYVDAFAGKAGQAILSYDAASKAGSLAIDFSGDAHADFAINLIGQATQADIVV |
| 1G9K Chain:A ((3-462)) | ---------GTSSAFTQIDNFSHFYDRG-DHLVNGKPSFTVDQVADQLTRSGASWHDLNNDGVINLTYTFLTAP------PVGYAS--RGLGTFSQFSALQKEQAKLSLESWADVAKVTFTEGPAAR-DDGHMTFANFSASNGGAAFAYLPN--SSRKGESWYLINKDYQVNKTPGEGNYGRQTLTHEIGHTLGLSHPGDY-----NPTYRDAVYAEDTRAYSVMSYWSEKNTGQVFTKTGEGAYASAPLLDDIAAVQKLYGANLETRADDTVYGFNSTADRDFYSATSSTDKLIFSVWDGGGNDTLDFSGFSQNQKINLTAGSFSDVGGMTGNVSIAQGVTIENAIGGSGNDLLIGNDAANVLKGGAGNDIIYGGGGADVLWGGTGSDTFVFGAVSDSTPKAADIIKDFQSGFDKIDLTAITKL--GG--LNFVDAFTGHAGDAIVSYHQASNAGSLQVDFSGQGVADFLVTTVGQVATYDIVA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59964 for 3926 contacts (-15.3/contact) +
2D Compatibility (PS) -47851 + (NN) -19510 + (LL) 824
1D Compatibility (HY) -42400 + (ID) 15150
Total energy: -184051.0 ( -46.88 by residue)
QMean score : 0.812
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