Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCELLGMSANVPTDIVFSFTGLMQRGGGTGPHRDGWGIAFYEGRGVRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQPKPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISACDEYRKKGVFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEPLTDNENWTLQQSGEWVLWWGGEVLAKGRV
1TE5 Chain:A ((3-255))
-CELLGMSANVPTDIVFSFTGLMQRGGGTGPHRDGWGIAFYEGRGVRLFQDPLASVDSEVARLVQRFPIKSETVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQPKPGFYRPVGETDSEAAFCDLLNRVRRAFPEPVPVEVLLPVLISACDEYRKKGVFNALISDGDWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATEPLTDNENWTLQQSGEWVLWWGGEVLAK---
General information:
TITO was launched using:
RESULT:
Template:
1TE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166127 for 2101 contacts (-79.1/contact) +
2D Compatibility (PS) -27712 + (NN) -19619 + (LL) 328
1D Compatibility (HY) -35600 + (ID) 12650
Total energy: -261380.0 ( -124.41 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_1TE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TE5-query.scw
PDB file :
Tito_Scwrl_1TE5.pdb
: