Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIR-------REMEFFEAGGQRVSLWSEVEHEFR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 2B0J Chain:A ((1-344)) | MKIAILGAGCYRTHAAAGITNFMRACEVAKEVGK------PEIALTHSSITYGAELLHLV-------------PDVKEVIVSD-PCFAEEPGLVVIDEFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLVHPEDVGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCVPEMKGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMPANLIGPVCDMCSAVTATVYAGLLAYRDAVTKILGAPADFAQMMADEALTQIHNLMKEKGIANMEEALDPAALLGTADSMCFGPLAEILPTALKVLEKHKVVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B0J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22843 for 653 contacts (-35.0/contact) +
2D Compatibility (PS) -10438 + (NN) -2146 + (LL) 1868
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -38159.0 ( -58.44 by residue)
QMean score : 0.315
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