Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA-PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEA--AQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
| 2PVU Chain:A ((38-261)) | ---------------------------------------------------------------GATKKKVVVGTD-AAFAPFEYMQ-KGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGI-SGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNALDLKGKTIGVQNATTGQEAAEKLFGK-GPHIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVIEDPKNFASEYYGMIFP-KNSELKAKVDEALKNVINSGKYTEIYKKWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124357 for 1793 contacts (-69.4/contact) +
2D Compatibility (PS) -23442 + (NN) -7415 + (LL) 5608
1D Compatibility (HY) -5600 + (ID) 1200
Total energy: -156406.0 ( -87.23 by residue)
QMean score : 0.383
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