Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRARGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
2Q2Q Chain:C ((1-255))
-TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI------------AQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGWLAQ
General information:
TITO was launched using:
RESULT:
Template:
2Q2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -160468 for 2143 contacts (-74.9/contact) +
2D Compatibility (PS) -25845 + (NN) -7550 + (LL) 752
1D Compatibility (HY) -29200 + (ID) 9400
Total energy: -231711.0 ( -108.12 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_2Q2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q2Q-query.scw
PDB file :
Tito_Scwrl_2Q2Q.pdb
: