Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTERKRWLAGCLSALLSLPLAAAVPGPDAPADLARGKAMAQKMCSRCHDDDGNGGPRPNRSYPKLAGLDREYLYKQIYDLKTQRRRNPATNGRGEELSAADVVNVSAWFAAQRMSAGEQTLADPRQRERGRQLFENGLAQRGVPPCVTCHGPAAQGLAALKAPRLAGQWAEYLATQLHGFRDGKRGNSATMRAVAGGLEDSHIQALAGYLGSLGP |
4O1W Chain:E ((2-79)) | -------------------------------DAAAGKAKSV-MCAACH---GAAGVSAVPTYPNLAGQKEAYLTKQLNDFKSGKRNDPTMKGMVMALSPADMENLAAYYANMK------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12262 for 537 contacts (-22.8/contact) +
2D Compatibility (PS) -8395 + (NN) -5545 + (LL) 7152
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -23850.0 ( -44.41 by residue)
QMean score : 0.462
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